csawUsersGuide: View csaw user's guide
In LTLA/csaw: ChIP-Seq Analysis with Windows
View source: R/csawUsersGuide.R
csawUsersGuide R Documentation
View csaw user's guide
Description
Finds the location of the user's guide and opens it for viewing.
Usage
csawUsersGuide()
Details
The csaw package is designed for de novo detection of differentially bound regions from ChIP-seq data.
It provides methods for window-based counting, normalization, filtering and statistical analyses via edgeR.
The user guide for this package can be obtained by running this function.
The user's guide is obtained online from the csawUsersGuide package.
We do not build the guide as a vignette in csaw itself due to the time-consuming nature of the code when run on realistic case studies.
This does mean, though, that this function requires an internet connection to work properly.
Value
The user's guide is opened on the system's default browser.
Author(s)
Aaron Lun
See Also
browseURL
Examples
if (interactive()) csawUsersGuide()
LTLA/csaw documentation built on Dec. 11, 2023, 5:11 a.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/csawUsersGuide.R
| csawUsersGuide | R Documentation |
View csaw user's guide
Description
Finds the location of the user's guide and opens it for viewing.
Usage
csawUsersGuide()
Details
The csaw package is designed for de novo detection of differentially bound regions from ChIP-seq data. It provides methods for window-based counting, normalization, filtering and statistical analyses via edgeR. The user guide for this package can be obtained by running this function.
The user's guide is obtained online from the csawUsersGuide package. We do not build the guide as a vignette in csaw itself due to the time-consuming nature of the code when run on realistic case studies. This does mean, though, that this function requires an internet connection to work properly.
Value
The user's guide is opened on the system's default browser.
Author(s)
Aaron Lun
See Also
browseURL
Examples
if (interactive()) csawUsersGuide()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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