visualizeGene: Provide a graphical visualization of a given gene and its...
In LZhang98/nsSNPHotspotViewer: Non-synonymous SNP Distribution Visualization
Description
Usage
Arguments
Value
Examples
View source: R/visualizeGene.R
Description
Draws a gray rectangle on an R plot environment to represent the full length of the gene.
x-axis labels are the position numbers of the gene's cDNA. On top of the rectangle,
vertical coloured line segments represent positions on which SNPs are found – the degree of
redness is a heatmap colour mapping that depicts its relative frequency.
Usage
1
visualizeGene(gene)
Arguments
gene
An S3 object of class Gene. The gene to be visualized. See ?initializeGene for
information on this class' attributes.
Value
Produces an R graphic visualization of the given gene.
Examples
1
2
gene <- initializeGene("Potri.001G345300.1.v3.0", snpPositions)
visualizeGene(gene)
LZhang98/nsSNPHotspotViewer documentation built on Dec. 31, 2020, 2:14 p.m.
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Description Usage Arguments Value Examples
View source: R/visualizeGene.R
Description
Draws a gray rectangle on an R plot environment to represent the full length of the gene. x-axis labels are the position numbers of the gene's cDNA. On top of the rectangle, vertical coloured line segments represent positions on which SNPs are found – the degree of redness is a heatmap colour mapping that depicts its relative frequency.
Usage
1 | visualizeGene(gene)
|
Arguments
gene |
An S3 object of class Gene. The gene to be visualized. See |
Value
Produces an R graphic visualization of the given gene.
Examples
1 2 | gene <- initializeGene("Potri.001G345300.1.v3.0", snpPositions)
visualizeGene(gene)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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