tag_layout: tag_layout

In LafontRapnouilTristan/EcophyCofog: Process EcoFog's ecophysio output

tag_layout

Description

tag_layout

Usage

tag_layout(
  tag_list,
  PCR_plates,
  output_path,
  file_corresp_tag,
  file_tag_layout
)

Arguments

tag_list	a dataframe with 3 column : 'tag_name' (e.g. f1 to fx and r1 to rx), 'tag_sequence' (e.g. ACACACAC) and 'tag_type' (i.e. forward or reverse)
PCR_plates	a matrix object representing your plates map/layout, output of "plate_layout" function of this package.
output_path	path to an output folder that will receive to new files
file_corresp_tag	name of the sample-tagpairs correspondance dataframe
file_tag_layout	name of your xlsx output, having the map of your tagz.

Value

an xlsx workbook with you tag plate plan and a csv file with your correspondance between tags and samples

LafontRapnouilTristan/EcophyCofog documentation built on Oct. 16, 2022, 9:37 a.m.