inst/unitTests/test_searchFunctions.R
In LaraSellesVidal/rfaRm: An R interface to the Rfam database
library(RUnit)
## Test rfamTextSearchFamilyAccession
checkTrue(is.element("RF00050", rfamTextSearchFamilyAccession("FMN")))
## Test rfamSequenceSearch
checkEquals(rfamSequenceSearch("GGAUCUUCGGGGCAGGGUGAAAUUCCCGACCGGUGGUAUAGUCCACGAAAGUAUUUGCUUUGAUUUGGUGAAAUUCCAAAACCGACAGUAGAGUCUGGAUGAGAGAAGAUUC")[[1]]$rfamID, "FMN")
LaraSellesVidal/rfaRm documentation built on Aug. 8, 2021, 7:25 p.m.
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library(RUnit)
## Test rfamTextSearchFamilyAccession
checkTrue(is.element("RF00050", rfamTextSearchFamilyAccession("FMN")))
## Test rfamSequenceSearch
checkEquals(rfamSequenceSearch("GGAUCUUCGGGGCAGGGUGAAAUUCCCGACCGGUGGUAUAGUCCACGAAAGUAUUUGCUUUGAUUUGGUGAAAUUCCAAAACCGACAGUAGAGUCUGGAUGAGAGAAGAUUC")[[1]]$rfamID, "FMN")
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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