README.md
In LeiLi-Uchicago/Cookie: An sampling method to select representative samples from large population
Cookie
Cookie: Selecting representative samples from single cell atlas using k-medoids clustering.
Please refer to https://WilsonImmunologyLab.github.io/Cookie/ for installation instruction and tutorial
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This method quantifies the relationships/similarities among samples using their Euclidian distances by vectorizing all given properties, and then determines an appropriate sample size by evaluating the coverage of key proprieties from multiple candidate sizes, following by a k-medoids clustering to group samples into several clusters, and selects centers from each cluster as the most representatives. \
LeiLi-Uchicago/Cookie documentation built on Jan. 26, 2024, 2:01 p.m.
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Cookie
Cookie: Selecting representative samples from single cell atlas using k-medoids clustering. Please refer to https://WilsonImmunologyLab.github.io/Cookie/ for installation instruction and tutorial
\
This method quantifies the relationships/similarities among samples using their Euclidian distances by vectorizing all given properties, and then determines an appropriate sample size by evaluating the coverage of key proprieties from multiple candidate sizes, following by a k-medoids clustering to group samples into several clusters, and selects centers from each cluster as the most representatives. \
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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