docs/documentation/02_installation.md

In LeonSong1995/MLM: Mixed model-based deconvolution of cell-state abundance

layout: page title: Installation description: ~

MeDuSA is implemented as an R package, which can be installed from GitHub by:

Dependencies

• R version >= 3.5.0
• R packages: Rcpp, foreach, Seurat, doSNOW, mgcv, RcppEigen, parallel, stats, BiocParallel

1. Installing Dependent Packages

install.packages("devtools")
install.packages("Seurat")
BiocManager::install("BiocParallel")

2. Installing MeDuSA

devtools::install_github("LeonSong1995/MeDuSA", build_vignettes=F)

3. Loading Package

library(MeDuSA)

4. Documentations

help(MeDuSA)

LeonSong1995/MLM documentation built on March 13, 2024, 1:21 p.m.