Man pages for Leonardini/treeCentrality
Computation of Network Science Statistics on Trees in Linear Time
| computeBasicStats | Basic summary statistics of a rooted phylo tree. |
| computeBetweenness | Betweenness centrality of a rooted binary phylo tree. |
| computeCherries | Compute the number of cherries |
| computeCloseness | Closeness centrality of a rooted binary phylo tree. |
| computeColless | Compute the Colless index |
| computeDelW | Compute the maximum delta-width statistic |
| computeDiameter | Diameter of a rooted binary phylo tree. |
| computeEigenvector | Eigenvector centrality of a rooted binary phylo tree. |
| computeFarness | Farness of a rooted binary phylo tree. |
| computeLMStats | Summaries of the distance Lapalcian spectrum (normalized or... |
| computeMatrix | Compute the matrix representation of a phylogenetic tree |
| computeMaxHeight | Compute the maximum height statistic |
| computeMaxWidth | Compute the maximum width statistic |
| computeNetworkStats | Network science-based statistics of a rooted phylo tree. |
| computeNum4to8 | Compute the number of clades of sizes 4 to 8 |
| computePitchforks | Compute the number of pitchforks |
| computeSackin | Compute the Sackin index |
| computeSpectralStats | Spectra of a rooted phylo tree. |
| computeSpectrum | Compute the spectrum (eigenvalues) of a matrix representing a... |
| computeStairs1 | Compute the first staircase-ness statistic |
| computeStairs2 | Compute the second staircase-ness statistic |
| computeWienerIndex | Wiener index of a rooted binary phylo tree. |
| rankDiscriminatoryStats | Ranking of the summary statistics of two lists of trees... |
| treeCentrality | 'treeCentrality': A package for computing tree shape... |
