Man pages for Leonardini/treeCentrality
Computation of network science statistics on trees in linear time

computeBasicStatsBasic summary statistics of a rooted phylo tree.
computeBetweennessBetweenness centrality of a rooted binary phylo tree.
computeCherriesCompute the number of cherries
computeClosenessCloseness centrality of a rooted binary phylo tree.
computeCollessCompute the Colless index
computeDelWCompute the maximum delta-width statistic
computeDiameterDiameter of a rooted binary phylo tree.
computeEigenvectorEigenvector centrality of a rooted binary phylo tree.
computeFarnessFarness of a rooted binary phylo tree.
computeMatrixCompute the matrix representation of a phylogenetic tree
computeMaxHeightCompute the maximum height statistic
computeMaxWidthCompute the maximum width statistic
computeNetworkStatsNetwork science-based statistics of a rooted phylo tree.
computeNum4to8Compute the number of clades of sizes 4 to 8
computePitchforksCompute the number of pitchforks
computeSackinCompute the Sackin index
computeSpectralStatsSpectra of a rooted phylo tree.
computeSpectrumCompute the spectrum (eigenvalues) of a matrix representing a...
computeStairs1Compute the first staircase-ness statistic
computeStairs2Compute the second staircase-ness statistic
computeWienerIndexWiener index of a rooted binary phylo tree.
treeCentrality'treeCentrality': A package for computing tree shape...
Leonardini/treeCentrality documentation built on June 7, 2017, 12:56 p.m.