run.BMA.2DF: BMA function for 2-degree-of-freedom Test

In LilithMoss/bma.gxe: GxE Analysis Using BMA

Description

BMA function for 2-degree-of-freedom Test

Usage

run.BMA.2DF(Y = NULL, E = NULL, G = NULL, Covar = NULL, cc = 0.05,
  co = 0.05, phi = 1, psi = 1000, formul = NULL)

Arguments

Y	input A vector of binary outcomes/phenotypes. Defaults to NULL.
E	input A vector of binary exposure status. Defaults to NULL.
G	input A vector of binary genotype. Defaults to NULL.
Covar	of all covariate variables. Defaults to NULL.
cc	input A number. Defaults to 0.5.
co	input A number. Defaults to 0.5.
phi	input A number. Defaults to 1.
psi	input A number. Defaults to 1000.
formul	input A string in the form: "Count~E+G+E:G+Y+E:Y+G:Y+E:G:Y+... . Defaults to NULL.

Value

The p-value for a BMA joint test of marginal and interaction effect.

LilithMoss/bma.gxe documentation built on May 28, 2019, 1:32 p.m.