README.md

In Linda24bc/Fragmonomass: calculate the monomass(1+) of by and cz ions.

monomass

predict diagnostic product ions for Hb variants

Installation

Install from GitHub:

Steps to get the results

package

library(dplyr) library(tidyr)

Input the sequennces-monomass

recz <- monomz("VHLTPEEKSAVT", fragments = "cz") reby <- monomz("VHLTPEEKSAVT", fragments = "by")

Input the sequennces-monomass2

results.cz <- monomz2("VHLTPEEKSAVT", fragments = "cz") results.by <- monomz2("VHLTPEEKSAVT", fragments = "by")

output results in .csv

write.csv(reby,"monomz.csv", row.names = FALSE) write.csv(results.by,"monomz2.csv", row.names = FALSE)

notes

elemental masses from https://urldefense.com/v3/http://www.unimod.org/masses.html;!!Epnw_ITfSMW4!70u-wn4cBUl0U9W7IpmajiAuCjZww1zrzKdl_2hMmp1s0U1nIq1xUC_5SZloY71D9Q$

Linda24bc/Fragmonomass documentation built on Sept. 8, 2021, 10:18 a.m.