cmdag: DAG Visualization

In LindaValeri/CMAverse: Causal Mediation Analysis

DAG Visualization

Description

Plot the directed acyclic graph (DAG) for causal mediation analysis.

Usage

cmdag(
  outcome = NULL,
  exposure = NULL,
  mediator = NULL,
  basec = NULL,
  postc = NULL,
  x.outcome = 4,
  x.exposure = 0,
  x.mediator = 2,
  x.basec = 2,
  x.postc = 2,
  y.outcome = 0,
  y.exposure = 0,
  y.mediator = 1,
  y.basec = 2,
  y.postc = -0.5,
  caption.width = 50,
  caption.size = 10,
  ...
)

Arguments

outcome	the variable name of the outcome
exposure	the variable name of the exposure
mediator	a vector of variable name(s) of the mediator(s)
basec	(optional) a vector of variable name(s) of the exposure-outcome confounder(s), exposure-mediator confounder(s) and mediator-outcome confounder(s) not affected by the exposure
postc	(optional) a vector of variable name(s) of the mediator-outcome confounder(s) affected by the exposure
x.outcome	x coordinate of outcome. Default is 4.
x.exposure	x coordinate of exposure. Default is 0.
x.mediator	x coordinate of mediator. Default is 2.
x.basec	x coordinate of basec. Default is 2.
x.postc	x coordinate of postc. Default is 2.
y.outcome	y coordinate of outcome. Default is 0.
y.exposure	y coordinate of exposure. Default is 0.
y.mediator	y coordinate of mediator. Default is 1.
y.basec	y coordinate of basec. Default is 2.
y.postc	y coordinate of postc. Default is -0.5.
caption.width	line width in characters for the caption. Default is 50.
caption.size	text size in pts for the caption. Default is 10.
...	additional arguments passed to ggdag(). See ggdag for details.

See Also

cmest, cmsens.

Examples

## basec and postc are empty
cmdag(outcome = "Y", exposure = "A", mediator = c("M1", "M2"),
     basec = NULL, postc = NULL, node = TRUE, text_col = "white")

## postc is empty
cmdag(outcome = "Y", exposure = "A", mediator = c("M1", "M2"),
     basec = c("C1", "C2", "C3"), postc = NULL, node = FALSE, text_col = "black")
     
## basec is empty
cmdag(outcome = "Y", exposure = "A", mediator = c("M1", "M2"),
     basec = NULL, postc = c("L1", "L2"), node = FALSE, text_col = "black")

## basec and postc aren't empty
cmdag(outcome = "Y", exposure = "A", mediator = c("M1", "M2"),
     basec = c("C1", "C2", "C3"), postc = c("L1", "L2"), node = FALSE, text_col = "black")

LindaValeri/CMAverse documentation built on June 15, 2024, 2:04 p.m.