plotOverallStats: Generate overall performance metrics for multiple samples

In Liuy12/DVboost: Adaptive Variant Filtering using generalized boosted regression models

Generate overall performance metrics for multiple samples

Description

If you are running DVboost on a set of samples and output to the same directory, the you can use plotOverallStats to examine the overall performance for all samples

Usage

plotOverallStats(outputdir, type = c("Both", "Fscore", "AUROC"),
  bylen = FALSE)

Arguments

outputdir	full path to output directory as specified in runDVboostwrapper
type	specify which type of metric is preferred, could be one of 'Fscore', 'AUROC' or 'Both'
bylen	logical value indicating whether to examine the performance by SV length instead. Default to FALSE

Value

a ggplot object

Liuy12/DVboost documentation built on May 25, 2022, 6:17 a.m.