LobsterMap: LobsterMap

In LobsterScience/bio.lobster: Lobster Stock Assessment Tools for DFO Maritimes

LobsterMap

Description

LobsterMap

Usage

LobsterMap(
  area = "custom",
  ylim = c(40, 52),
  xlim = c(-74, -47),
  save = F,
  fname = "LobsterMap",
  mapRes = "HR",
  land.col = "wheat",
  title = "",
  nafo = NULL,
  boundaries = "LFAs",
  bathy.source = "topex",
  isobaths = seq(100, 1000, 100),
  bathcol = rgb(0, 0, 1, 0.1),
  topolines = NULL,
  topocol = rgb(0.8, 0.5, 0, 0.2),
  points.lst = NULL,
  pt.cex = 1,
  lines.lst = NULL,
  poly.lst = NULL,
  contours = NULL,
  image.lst = NULL,
  color.fun = tim.colors,
  zlim,
  grid = NULL,
  stippling = F,
  lol = F,
  labels = "lfa",
  labcex = 1.5,
  LT = T,
  plot.rivers = T,
  addGridGroups = F,
  addSummerStrata = F,
  polylstend = F,
  addsubareas = F,
  subsetSummerStrata = NULL,
  addGeorgesStrata = F,
  addAmericanStrata = F,
  addGrids = T,
  land.only = F,
  grid.labcex = 1,
  special.labels = NULL,
  ...
)

Arguments

area	= 'custom' where xlim & ylim are specified or select from area list below
mapRes	= coastline detail ('LR' = low resolution, 'MR' = medium resolution, 'HR' = high resolution, 'UR' = ultra resolution)
title	= plot title
boundaries	= for ploting specific management boundaries
bathcol	= topolines line color, default is transparent brown
topolines	= plots topographic lines for specified elevations from topex data
points.lst	= points to overlay on map in PBSmapping format - list with 2 elements: 1st element is eventSet (EID, POS, X, Y), 2nd element is eventData (EID, pch, col, etc.)
lines.lst	= lines to overlay on map in PBSmapping format - list with 2 elements: 1st element is polySet (PID, SID, POS, X, Y), 2nd element is polyData (PID, SID, lty, col, etc.)
poly.lst	= polygons to overlay on map in PBSmapping format - list with 2 elements: 1st element is polySet (PID, SID, POS, X, Y), 2nd element is polyData (PID, SID, border, col, etc.)
contours	= plots overlaping polygons as contours (same format as poly.lst)
image.lst	= image to overlay on map - list with 3 elements (x, y, z), 'bathymetry' produces image from bathymetry data
color.fun	= color function for image
zlim	= zlim for image
grid	= size of grid in degrees, default is no grid
stippling	= adds stippling to land (purely for visual effect)
lol	= adds water colored border to coastline (purely for visual effect)
isobath	= plots bathymetry lines for specified depths from topex data

Author(s)

Brad Hubley

Examples

LobsterMap(area='34')
catchgrids <-lobGridPlot(subset(logsInSeason,SYEAR==2007,c("LFA","GRID_NUM","WEIGHT_KG")),lvls=c(100,50000,100000,200000,400000,600000,800000,1000000),FUN=sum,border=NA)
LobsterMap('all',poly.lst=catchgrids[1:2],title="2007 Lobster Catch")
ContLegend("bottomright",lvls=catchgrids$lvls/1000,Cont.data=catchgrids,title="Catch (t)",inset=0.02,cex=0.8,bg='white')

LobsterScience/bio.lobster documentation built on Feb. 14, 2025, 3:28 p.m.