CAMPrepObj-class: Class "CAMPrepObj"

Description Slots

Description

An S4 class for storing data preprocessing results.

Slots

Valid

logical vector to indicate the genes left after filtering.

Xprep

Preprocessed data matrix.

Xproj

Preprocessed data matrix after perspective projection.

W

The matrix whose rows are loading vectors.

cluster

cluster results including two vectors. The first indicates the cluster to which each gene is allocated. The second is the number of genes in each cluster.

c.outlier

The clusters with the gene number smaller than MG.num.thres.

centers

The centers of candidate corner clusters (candidate clusters containing marker genes).


Lululuella/debCAM documentation built on May 14, 2021, 2:45 p.m.