create_sub_library: create_sub_library

In MASHUOA/MassOmics: Data extraction pipeline for large-scale GC-MS metabolomics datasets

create_sub_library

Description

This is a function for peak integration according to the IDs in identification summary

Usage

create_sub_library(
  workdir = tk_choose.dir(caption = "Select working directory")
)

Arguments

workdir	locate the working Dir
output	specify the output file name initial
Ion.bin	the mz tolerance (Da) for peak integration
intensity_type	the type of signal to be reported "Peak Height" or "Peak Area"
GGReport	the reporting mode "Slow" plot every integrated peak, or "Fast" generate an overall report

Value

None

Examples

GCMS_integration()

MASHUOA/MassOmics documentation built on Nov. 3, 2023, 10:48 p.m.