univ_forestplot_eumelareg: Forest Plot for Cox Proportional Hazards Model in EuMelaReg...

In MBender1992/emR: Dictionary for EuMelaReg functions (analysis of clinical studies)

Forest Plot for Cox Proportional Hazards Model in EuMelaReg style

Description

This code generates a forest plot from a coxph model.

Usage

univ_forestplot_eumelareg(
  data,
  time,
  status,
  vars,
  main = "Hazard ratio for disease progression or death (95% CI)",
  y_breaks = NULL,
  cpositions = c(0, 0.1, 0.3),
  point.size = 3,
  fontsize = 0.8,
  line.size = 0.7,
  vjust_text = 1.2,
  refLabel = "reference",
  noDigits = 2,
  varnames = NULL,
  ylim = NULL
)

Arguments

data	a dataset used to fit survival curves. If not supplied then data will be extracted from 'fit' object.
time	the time interval from start of observation until date of event (e.g. disease progression or death) or censoring.
status	variable specifying if event occured or data has been censored.
vars	variables that were used in the coxph model
main	title of the plot.
y_breaks	argument to supply manual y_breaks as a numerical vector. Default is NULL and breaks are set automatically within the function.
cpositions	relative positions of first three columns in the OX scale.
point.size	Size of mean points.
fontsize	relative size of annotations in the plot. Default value: 0.7.
line.size	Size of errorbar line.
vjust_text	vertical adjustment of text containing information about events, global pvalue, AIC and concordance index
refLabel	label for reference levels of factor variables.
noDigits	number of digits for estimates and p-values in the plot.
varnames	Character vector specifying rownames of the table (empty columns should be named with "").
ylim	argument to supply manual y limits as numerical vector of length 2. Default is NULL and limits are set automatically within the function.

MBender1992/emR documentation built on Feb. 18, 2025, 9:21 a.m.