Man pages for MFEh2o/MFEUtilities
Utility functions for the MFE Database

bootstrap.metabBootstrap Metabolism Bootstrapping function for metabolism...
calcZMixDensCalculate Z Mix Density Using density instead of temp to...
checkColsCheck for missing/extra columns
checkDistanceCheck Distance Function to check the distance between pairs
checkINFOCheck that all INFO ID's are in SAMPLES
checkMetCheck that all metadataID's show up in the METADATA table....
checkOOBCheck OOB Function to check whether a given row is OOB, based...
colsCheckCheck that a data frame has certain columns
dateCheckCheck 'sampleID' date against 'dateSample'
dateSampleCheckCheck that dates match between 'dateSample' and...
dateSetCheckCheck that dates match between 'dateSet' and 'dateTimeSet'
dbTableImport an MFE database table, and (optionally) do a little...
dbTableListList names of the tables in the MFE database
dbTableSummaryList column names in a MFE database table
dfCheckCheck whether something is a data frame
fillHolesFill Holes Linearly interpolate values for strings (up to...
findNotDupRowsFind Not Dup Rows Function to find duplicate datetime stamps....
floorMinsFloor Mins Round all time down to nearest timeStep (e.g. if...
getDataGet data in all database tables that matches specific...
getNearPairsToCheckGet Near Pairs to Check This function picks out the...
lakeSiteCheckLake Site Check Given a lake, examine cumulative number of...
lookForDBThrow an error if trying to connect to a database file that...
metabLoss_v4Metab Loss, Version 4 Estimating Metabolism from DO data....
metabPredix_v4Metab Predix Version 4 Return DOHat, residuals, atmFlux, and...
mfeMetabmfeMetab Functionality for generating lake metabolism...
named_group_splitNamed Group Split Function written by Romain Francois, here:...
parseSampleIDParse sampleID's. KG NOTE: The <<- assignment here is not...
pipePipe operator
processAvgsAndSinglesProcess Averages and Singletons Process the avgsAndSingles...
processCheckedNearPairsProcess Checked Near Pairs Assign QC codes to near pairs...
processFarPairsProcess Far Pairs Function to process far-apart pairs. Once...
processNewDataProcess New Data (main function) This is the main function, a...
recreateSampleIDsAttempt to recreate sampleID's from component parts. KG note:...
rrReverse Regex
sameTimeCheck for rows where 'dateTimeSet' and 'dateTimeSample' are...
sensordbTableSensor DB Table Retrieving a table from the sensor database....
sensordbTableListSensor DB Table List Listing table names in the MFE sensor...
timeCheckCheck 'sampleID' time against the time portion of...
timeTravelCheck that sample-set time spans are logical
MFEh2o/MFEUtilities documentation built on May 6, 2023, 1:33 p.m.