MG-RAST/MGRASTer: API Client for the MG-RAST Metagenomics Analysis Server

Convenience functions for using the v.1 API of the MG-RAST metagenomics analysis server. <https://api.mg-rast.org> This package can construct a model of the API syntax, use the model to validate API calls and API returns, and will place low-level requests to the API, automatically managing authorization and returning the data as R frames. Used by the user-facing client, 'matR', that supports asynchronous requests and metadata download. MG-RAST is described in Wilke, A. (2013) <10.1016/B978-0-12-407863-5.00022-8> and Meyer, F. (2017) <10.1093/bib/bbx105>.

Getting started

Package details

MaintainerWilliam L. Trimble <[email protected]>
LicenseBSD_2_clause + file LICENSE
Version0.9.1
URL https://github.com/braithwaite/MGRASTer/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("MG-RAST/MGRASTer")
MG-RAST/MGRASTer documentation built on May 17, 2019, 11:14 p.m.