BIOMrename: Change row and column identifiers of BIOM data
In MG-RAST/matR: Metagenomics Analysis Tools

Description Usage Arguments Details Value Author(s) See Also Examples

Change the dimnames (BIOM row and column ids) of an object of class biom.

1 2	## S3 replacement method for class 'biom' dimnames(x) <- value

`x`	an object (`biom`)
`value`	new row and column identifiers (`list` of `character`)

Complete technical documentation is forthcoming. For the current preliminary release, please refer to the examples provided.

The argument x with updated row and column ids (that is, dimnames).

Daniel T. Braithwaite

BIOM.utils::biom, BIOM.utils::dimnames.biom

####  even if not particularly useful, this is allowed
yy <- xx4
dimnames (yy) <- list (letters [1:nrow(yy)], LETTERS [1:ncol(yy)])

####  more useful: renaming columns by codes taken from metadata
colnames (yy) <- columns (yy, "sample.data.sample_name")