check_candidate_ids | Check if candidate IDs are ready for analysis |
connect | Connect to graph |
determine_analyses | What analyses are to be run? |
getcon | Get connection to inventory.sqlite |
get_genassoc | <brief desc> |
get_instruments | <brief desc> |
get_mr | Get MR estimates |
get_mrmoe | Get MR-MOE estimates |
get_traits | Get traits |
initialise_analysis | Generate viable candidate analysis list |
modify_node_headers_for_neo4j | Modify headers for neo4j |
modify_rel_headers_for_neo4j | Modify headers for neo4j |
mrever_to_mr | Create TwoSampleMR dat object |
phewas | Perform phewas |
random_string | Generate random string |
readml | Read in extracted data format |
setup_inventory | Initial creation of inventory |
write_out | Write as csv for neo4j |
write_simple | Wrapper to write out files |
write_split | Write out to csv.gz, split to make more manageable files |
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