NEWS.md

In MSKCC-Epi-Bio/tidycmprsk: Competing Risks Estimation

tidycmprsk (development version)

tidycmprsk 1.1.0

• Updating package to account for changes in {gtsummary} v2.0. To use gtsummary::tbl_regression() with tidycmprsk::crr() models, the {tidycmprsk} package must be loaded (to access the S3 methods below). In the next release of gtsummary, tidycmprsk will no longer be a dependency.
• Added {broom.helpers}, {cardx}, and {aod} to Suggests field.
• Added tbl_regression.tidycrr() method.
• Added global_pvalue_fun.tidycrr() method, which changes the default calculation in gtsummary::add_global_p(anova_fun) to use the Wald test.

tidycmprsk 1.0.0

• Corrected a previous regression bug and cuminc() can again handle models with no observed censoring. (#89)

• Performance improvements to cuminc(). (@pteridin; #73)

• The autoplot() method for cuminc() objects is now defunct in favor of ggsurvfit::ggcuminc(). (#100)

• Updates ahead of the {purrr} v1.0 release.

tidycmprsk 0.2.0

• The autoplot.tidycuminc() method has been deprecated in favor of ggsurvfit::ggcuminc(). (#81)

• Fix in cuminc() when one or more strata levels has no observations with one of the outcomes observed.

• Updated cuminc() and crr() to drop un-observed factor levels before processing the data. Previously, un-observed levels led to a singularity error. (#76)

• Bug fix in tidy.tidycuminc() when times specified are after the maximum follow-up time. (#77)

• Re-wrote an ifelse() statement to avoid a warning when tied times are present in cuminc(). (#74)

tidycmprsk 0.1.2

• The "strata" column in tidied cuminc() results is now a factor. (#62)

• Fix in the documentation for tbl_cuminc() that resulted in a UTF-related error on Debian system R CMD Check. (#65)

• Adding vcov() method for crr() models (#63)

tidycmprsk 0.1.1

• Adding the tbl_cuminc() function (similar to gtsummary::tbl_survfit()). Also added related methods, add_n.tbl_cuminc(), add_nevent.tbl_cuminc(), add_p.tbl_cuminc(), and inline_text.tbl_cuminc()

• Updated the definition of n.event and n.censor in tidy.tidycuminc() to match summary.survfit() when users specify tidy.tidycuminc(times=). We now report the cumulative number of events/censors in the interval prior to the specified times. (#49)

• Added crr(conf.level=) and cuminc(conf.level=) arguments. The tidy data frame returned with each of these objects now has confidence limits that match conf.level=. (#45)

• The tidy.ticycrr() and tidy.ticycuminc() conf.level= defaults have been updated to x$conf.level passed in the original model call.

• Now returning the the number at risk, number of events, and the number of censored observations in tidy.tidycuminc().

• Updated the default value to tidy.tidycuminc(conf.int = TRUE) from FALSE

• Update the crr() and cuminc() print methods for more clarity.

• Update documentations for cuminc() method with an explicit formula for the confidence interval.

• Returning the cumulative number of events and the cumulative number of censored observations in tidy.tidycuminc().

• The autoplot() figure will now display the first outcome only as default. Previously, all outcomes were shown by default.

tidycmprsk 0.1.0

• Initial Release.

MSKCC-Epi-Bio/tidycmprsk documentation built on Aug. 19, 2024, 4:40 a.m.