MigSchedule: Determine migratory schedule from archival light-level...

In MTHallworth/LLmig: LLmig: Migration schedules from Light-level geolocators

Description

Determine migratory schedule from archival light-level geolocator data.

Usage

MigSchedule(MCMC, prob = 0.95, mig.quantile = 0.95,
  stationary.periods = NULL, stationary.duration = 2,
  collapseSites = FALSE, rm.lat.equinox = FALSE, days.omit = 5,
  progress = TRUE, plot = TRUE, plot.legend = TRUE)

Arguments

MCMC	a slices object.
prob	probability estimate to return for daily positions
mig.quantile	probability for determining movement periods
stationary.duration	minimum number of stationary days to consider stationary periods, default == 2
rm.lat.equinox	logical remove dates from consideration around equinox
days.omit	integer how many days on either side to remove if rm.lat.equniox == TRUE
collapseSites	logical merge stationary sites if the previous median location falls within subsequent stationary site
progress	logical show progress bar
plot	logical plot results upon completion
plot.legend	logical plot legend with dates on figure

Value

list DailyPositions - geographically weighted mean and associated errors Schedule - arrival and departure dates of stops movements rasterStack of Schedule.

MTHallworth/LLmig documentation built on April 27, 2021, 3:57 p.m.