member_similarity: Calculate pair-wise similarity in an expresison matrix
In MahShaaban/aacna: Analysis Compendium of the Autophagy and AMPK Co-expression
Description
Usage
Arguments
Value
Description
Calculate pair-wise similarity in an expresison matrix
Usage
1
member_similarity(dat, measure = "all")
Arguments
dat
A data.frame of transposed expression matrix
measure
A character string of the similarity measure
Value
A data.fame. When measure is 'all'
x1 A gene ID
x2 A gene ID, as in edge list (x1 –> x2)
value The value of the measure
measure either Adjacency, TOM or Pearson
MahShaaban/aacna documentation built on May 17, 2019, 6:21 p.m.
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Description Usage Arguments Value
Description
Calculate pair-wise similarity in an expresison matrix
Usage
1 | member_similarity(dat, measure = "all")
|
Arguments
dat |
A data.frame of transposed expression matrix |
measure |
A character string of the similarity measure |
Value
A data.fame. When measure is 'all'
x1 A gene ID
x2 A gene ID, as in edge list (x1 –> x2)
value The value of the measure
measure either Adjacency, TOM or Pearson
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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