In MalteThodberg/nanotubes: Mouse nanotube CAGE data

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)

Data and citation

The nanotubes packages contains CAGE data from the paper "Identification of Gene Transcription Start Sites and Enhancers Responding to Pulmonary Carbon Nanotube Exposure in Vivo" (https://pubs.acs.org/doi/abs/10.1021/acsnano.6b07533). Data is provided as CAGE Transcription Start Sites (CTSSs) stored as BigWig-files, along with the study design.

If you use nanotubes, please cite the following article:

citation("nanotubes")

Installation

You can install the development version directly from GitHub using devtools:

devtools::install_github("MalteThodberg/nanotubes")

MalteThodberg/nanotubes documentation built on May 23, 2019, 3:03 a.m.