Description Usage Format Details Examples
Dataset of survival, fecundity, mutation, dispersal, initial population size and number of years of simulation for a four-deme metapopulation.
1 |
This dataset contains the objects demographic.data, mu, kappa0, delta
and T_max
.
demographic.data
is a data frame containing survival probabilities and fecundities for each genotype, deme, age-class and time and the initial number of individuals for time = 1.
mu
is is the mutation matrix. See FourPopMonoecious
for a detailed description.
delta
is the dispersal matrix. See FourPopMonoecious
for a detailed description.
kappa0
is the carrying capacity. See the function sim.metapopgen.monoecious
for further details on this parameter.
T_max
Number of years of simulation.
The FourPopDataFrameMonoecious
dataset has one locus with 2 alleles (therefore, 3 genotypes), 4 demes and 6 age-classes. Survival and fecundities do not differ among demes, years or genotypes, but change with age. Survival increases from 0.4 at age 1 to 0.6 at ages 3-6. Fecundity is zero from age 1 to age 4, is moderate at age 5 and is maximal at age 6.
1 2 3 4 | data(FourPopDataFrameMonoecious)
# Run the simulation
N <- sim.metapopgen.monoecious(input.type="data.frame",demographic.data=demographic.data, mu=mu, delta=delta, kappa0=kappa0)
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