lmepredict: lmepredict: function to predict vital rates conform to the...

In MarcoDVisser/IPM2s: Tools for building a 2 stage IPM

Description

lmepredict: function to predict vital rates conform to the standard approach, but with more control on some processes. LME predict function

Usage

lmepredict(x, mod = NULL, liana = NULL, sp = NULL, betas = NULL,
  time = 1, onlyfixedeffect = FALSE, switchoffliana = NULL,
  returngrowth = FALSE)

Arguments

x	design matrix
mod	fit lme4 model and normalization coef (in a list)
liana	which liana class?
sp	which species to use
time	time correction for binomial models?
switchoffliana	numeric: which liana cat (1:4) to switch off?
returngrowth	return growth instead of size next?
beta	used to provide fit with legacy code (mod = beta)
onlyfixedeffects	logical: only used the fixed effects in predictions

MarcoDVisser/IPM2s documentation built on May 7, 2019, 2:49 p.m.