cleanPrepareSpecList: cleanPrepareSpecList

Description Usage Arguments Author(s) See Also

Description

This function takes the provided species list and cleans up common issues with field names

Usage

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cleanPrepareSpecList(spec_list = NULL, sci_col = NULL, comm_col = NULL,
  sci_Filts = NULL, comm_Filts = NULL)

Arguments

spec_list

- df containing fields you want to check webservices for codes for

sci_col

- name of the field in the df which contains scientific names

comm_col

- name of the field in the df which contains common names

sci_Filts

- regex values that can identify values within the scientific name column that you want the script to totally ignore

comm_Filts

- regex values that can identify values within the common name column that you want the script to totally ignore

Author(s)

Mike McMahon, Mike.McMahon@dfo-mpo.gc.ca

See Also

Other speciesCodes: assignDefinitive, do_ritis, do_taxize, do_worrmsAphiaID, do_worrmsTSN, do_worrms, getTaxaIDs


Maritimes/bio.odissupport documentation built on May 31, 2019, 8:01 a.m.