Zcurve: Compute and display the GC-disparity curve

In MarkoLebo/FindOri: Package for oriC detection and genomic signals display

Description

A function, that computes the GC-disparity curve from Z-curve of the input genome and displays it consecutively.

Usage

Zcurve(sek)

Arguments

sek	a vector with nucleotide sequence of genome, saved in DNAString

Value

returns the value of minimum of the GC-disparity curve and displays the plot of the same curve

Author(s)

Marko Lebo <[e-mail]>

Examples

## Not run: 
sek<-readDNAStringSet('sequence.fasta')
sek<-sek[[1]]
Min <- Zcurve(sek)

## End(Not run)

MarkoLebo/FindOri documentation built on May 7, 2019, 3:35 p.m.