| calcU | Calculate,U, the harvest rate and maximum sustainable yield. |
| createDefaultPriors | create default model priors |
| createInitValsFunc | create function that generates initial values for the Grand... |
| createJAGScode | creates the JAGS code for the model |
| createJAGSdata | create a data list for the JAGS models |
| expandAllData | Expands data to include all years and observations for all... |
| expandData | Expands data to include all years and observations. |
| fillGaps | fills gaps in a series |
| fillGapsKern | fills gaps in a series using neighbors |
| getPostDraws | get posterior draws from a model object |
| getPosteriorSummary | get table summarizing the posterior distributions for the... |
| getRhat | a function to retrieve the Rhat values from the model object |
| hello | Hello, World! |
| invLogit | inverse logit function |
| logit | logit function |
| plotAge | Plot predicted vs observed age composition. |
| plotEsc | Plot predicted vs observed escapement. |
| plotParam | Plot a parameter by year and population. |
| plotPost | Plot posteriorsDists. |
| plotXY | plots two variables against each other |
| predictVal | Generate model predictions based on the posterior |
| simulateData | Simulate data based on the fitted model |
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