MMRFquery_clinic: Get GDC clinical data
In MarzyUnicz/MMRFBiolinksX:
Description
Usage
Arguments
Value
Examples
Description
MMRFquery_clinical will download and prepare all clinical information from the API
as the one with using the button from each project
Usage
1
MMRFquery_clinic(type = "clinical", save.csv = FALSE)
Arguments
type
A valid type. Options "clinical", "Biospecimen" (see list with getGDCprojects()$project_id)]
save.csv
Write clinical information into a csv document
"MMRF-COMMPASS"
project
MMRF-COMMPASS
Value
A data frame with the clinical information
Examples
1
2
3
4
5
6
clin.mm<-MMRFquery_clinic(type = "clinical", save.csv = TRUE)
clin.mm<-MMRFquery_clinic(type = "biospecimen", save.csv = TRUE)
## Not run:
clin <- MMRFquery_clinical(type = "clinical")
## End(Not run)
MarzyUnicz/MMRFBiolinksX documentation built on April 7, 2020, 1:05 p.m.
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Description Usage Arguments Value Examples
Description
MMRFquery_clinical will download and prepare all clinical information from the API as the one with using the button from each project
Usage
1 | MMRFquery_clinic(type = "clinical", save.csv = FALSE)
|
Arguments
type |
A valid type. Options "clinical", "Biospecimen" (see list with getGDCprojects()$project_id)] |
save.csv |
Write clinical information into a csv document |
"MMRF-COMMPASS" |
project
|
Value
A data frame with the clinical information
Examples
1 2 3 4 5 6 | clin.mm<-MMRFquery_clinic(type = "clinical", save.csv = TRUE)
clin.mm<-MMRFquery_clinic(type = "biospecimen", save.csv = TRUE)
## Not run:
clin <- MMRFquery_clinical(type = "clinical")
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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