MathieuEmily/SMILE: Detecting subpopulation under selection in a genomic region
The aim of this package is to propose an implementation of the SMILE statistical method. Such a method aims at detecting subpopulation(s) (breed for example) under selection. Based on the haplotype data in a given genomic region, the method computes the d2s dissimilarity and performs a hierarchical clustering to extract the subpopulation under selection.
Getting started
Browse package contents
Package details |
|
|---|---|
| Author | Mathieu Emily |
| Maintainer | Mathieu Emily <mathieu.emily@agrocampus-ouest.fr> |
| License | GPL (>= 2) |
| Version | 0.99.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
|
