eem_ife_correction: Wrapper function to allow eem_inner_filter_effect (eemR)...

In MatthiasPucher/staRdom: PARAFAC Analysis of EEMs from DOM

Wrapper function to allow eem_inner_filter_effect (eemR) handling different cuvette lengths.

Description

Calls eem_inner_filter_effect for each sample to use different cuvette lengths.

Usage

eem_ife_correction(
  data,
  abs_data,
  cuvl = NULL,
  unit = c("absorbance", "absorption")
)

Arguments

data	fluorescence data of class eemlist
abs_data	absorbance data
cuvl	length of cuvette of absorption measurment in cm. Either a number or a data frame. Row names of data frame have to be similar to sample names in data. This is ignored, if unit is "absorption".
unit	unit of absorbance data. Either "absorbance" or "absorption".

Value

fluorescence data of class eemlist

Examples

folder <- system.file("extdata/cary/scans_day_1", package = "eemR") # load example data
eem_list <- eem_read(folder, import_function = "cary")
data(absorbance)

eem_list <- eem_ife_correction(data = eem_list, abs_data = absorbance,
    cuvl = 5, unit = "absorbance")

MatthiasPucher/staRdom documentation built on June 30, 2023, 10:55 a.m.