getFasta: getFasta

In MaudeDavidLab/GMEmbeddings: Creates a Matrix of Embeddings

getFasta

Description

Function reads in your fasta file puts it in a format that can be used as an argument in the EmbedAsvTable function.

Usage

getFasta(fasta_file_name)

Arguments

fasta_file_name

The fasta_file_name should be given as the file path to your .fasta file and should be in quotes.

Author(s)

Christine Tataru

Examples

## The function is currently defined as
function (fasta_file_name)
{
    fasta_file <- getExampleFasta(fasta_file_name)
    fasta_df <- getFastaDF(fasta_file)
    return(fasta_df)
  }

MaudeDavidLab/GMEmbeddings documentation built on March 31, 2022, 3:12 a.m.