getBlastHits: getBlastHits

In MaudeDavidLab/gut_microbiome_embeddings_package: Creates a Matrix of Embeddings

getBlastHits

Usage

getBlastHits(blast_hits_file)

Arguments

blast_hits_file

blast_hits_file should be a .tsv file obtained after aligning your sequences using BLAST

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (blast_hits_file)
{
    blast_hits <- read.delim(blast_hits_file)
    return(blast_hits)
  }

MaudeDavidLab/gut_microbiome_embeddings_package documentation built on April 1, 2022, 4:48 a.m.