sim_single | R Documentation |
This function calculates the resulting generated number of colony forming units in the mixed sample in the single mixing plan with single stage of the mixing.
sim_single(mu, sigma, alpha, k, distribution, summary, n_sim)
mu |
the average number of CFUs ( |
sigma |
the standard deviation of the colony-forming units in the mixed sample on the logarithmic scale (default value 0.8) |
alpha |
concentration parameter |
k |
number of small portions / primary samples |
distribution |
what suitable distribution type we have employed for simulation such as |
summary |
if we need to get all simulated |
n_sim |
number of simulations |
Let N'
be the number of colony-forming units in the mixed sample which is produced by mixing of k
primary samples and N' = \sum N_i
. To more details, please refer the details section of compare_mixing_3.
total number of colony forming units in the single mixing plan
Nauta, M.J., 2005. Microbiological risk assessment models for partitioning and mixing during food handling. International Journal of Food Microbiology 100, 311-322.
compare_mixing_3
mu <- 100
sigma <- 0.8
alpha <- 0.1
k <- 30
n_sim <- 20000
sim_single(mu, sigma, alpha, k, distribution = "Poisson lognormal-Type B", summary = 1, n_sim)
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