Man pages for McCannLab/HomogenFishOntario
Analysis for study described in DOI: 10.1111/gcb.14829
| an0_retrieve_species_info | Retrieve taxonomic information. |
| an1_gain_loss | Compute gains and losses |
| an2_occurrence_species | Occurrence analysis |
| an3_regressions | Regressions |
| an4_contributions_beta | Contribution to beta diversity metrics |
| df_fished | Information about commercial aspects of fish species |
| df_species_info | Characteristics of Ontarian freshwater fish species |
| fig2_homogenization | Draw Figure 2 |
| fig3_regressions | Create figure 2 - Regressions |
| fig4_table | Create figure 3 |
| fig5_piecharts | Draw Figure 5 |
| fig6_contributions_beta | Draw Figure 6 |
| figS1_outliers | Draw Figure S1 |
| figS2_abiotic | Draw Figure S1 |
| figS3_lossgain | Draw Figure S3 |
| figS4_homogenization_panels | Draw Figure S4 |
| figS5_saturation | Draw Figure S5 |
| figS6_northward | Draw Figure S6 |
| figS7_occupancy_trends | Draw Figure S7 |
| figS8_boats | Draw Figure S8 |
| figZ1_fnf_regressions | Draw Figure Z1 |
| figZ2_coldest | Draw Figure Z2 |
| gadm_ontario | Ontario boundaries |
| homogenOntario | homogenOntario |
| pipeline | Pipeline |
| sf_bsm_ahi | Lake data for AHI and BSM survey |
