eda_heatmap: Make a heatmap of a select number of genes
In McConkeyLab/bladdr: A Helping Hand in McConkey Land
eda_heatmap R Documentation
Make a heatmap of a select number of genes
Description
Make a heatmap of a select number of genes
Usage
eda_heatmap(dds, genes, stratifier = NULL, assay = 2, ...)
Arguments
dds
a dds object with HGCN symbols as rownames
genes
a character vector containing the names of HGCN symbols to be plotted in the heatmap
stratifier
optional. A character vector specifying a column in colData by which to color samples in the pheatmap.
assay
the assay number that contains normalized counts
...
additional arguments that will be passed to pheatmap
Value
a pheatmap
McConkeyLab/bladdr documentation built on April 6, 2024, 3:15 a.m.
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| eda_heatmap | R Documentation |
Make a heatmap of a select number of genes
Description
Make a heatmap of a select number of genes
Usage
eda_heatmap(dds, genes, stratifier = NULL, assay = 2, ...)
Arguments
dds |
a |
genes |
a character vector containing the names of HGCN symbols to be plotted in the heatmap |
stratifier |
optional. A character vector specifying a column in colData by which to color samples in the pheatmap. |
assay |
the assay number that contains normalized counts |
... |
additional arguments that will be passed to |
Value
a pheatmap
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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