| clusterAnalysis | clusterAnalysis |
| createOrLoadAnnotations | createOrLoadAnnotations |
| doClusterAnalysis | doClusterAnalysis |
| doGeneAnnotation | doGeneAnnotation |
| doGOAnalysis | doGOAnalysis |
| doKEGGAnalysis | doKEGGAnalysis |
| doLmAnalysis | doLmAnalysis |
| doMultCompAnalysis | doMultCompAnalysis |
| filterData | filterData |
| GeneAnnotation | GeneAnnotation |
| GOAnalysis | GOAnalysis |
| KEGGAnalysis | KEGGAnalysis |
| lmAnalysis | lmAnalysis |
| multipleComp | multipleComp |
| normalization | normalization |
| normplots2File | normplots2File |
| readOrLoad.RawData | readOrLoad.RawData |
| saveData | saveData |
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