API for MeriemBahda/LassosumExtension
LASSO with summary statistics and a reference panel for multiple phenotypes
| Global functions | |
|---|---|
| .pgs | Source code |
| .pgs.default | Source code |
| Correlation | Source code |
| adaptive.weights | Source code |
| comp.ss.bim | Source code |
| countlines | Source code |
| elnet | Source code |
| elnetR | Source code |
| elnet_s1 | Source code |
| genotypeMatrix | Source code |
| group.blocks | Source code |
| indeplasso | Source code |
| lassosum | Source code |
| lassosum.pipeline | Source code |
| lassosumR | Source code |
| logical.vector | Source code |
| matchpos | Source code |
| merge.lassosum | Source code |
| merge.lassosum.pipeline | Source code |
| multiBed3 | Source code |
| multiBed3sp | Source code |
| multivariateLassosum | Man page |
| multivariateLassosum-package | Man page |
| ncol.bfile | Source code |
| normalize | Source code |
| not.a.file | Source code |
| nrow.bfile | Source code |
| p2cor | Source code |
| parse.pheno.covar | Source code |
| parseargs | Source code |
| parseblocks | Source code |
| parseselect | Source code |
| pgs | Source code |
| pgs.vec | Source code |
| plot.validate.lassosum | Source code |
| pseudovalidate | Source code |
| pseudovalidation | Source code |
| read.table2 | Source code |
| readbfile | Source code |
| repelnet | Source code |
| runElnet | Source code |
| runElnet_s1 | Source code |
| sd.bfile | Source code |
| selectregion | Source code |
| splitgenome | Source code |
| splitvalidate | Source code |
| splitvalidate.lassosum.pipeline | Source code |
| splitvec.from.bfile | Source code |
| subset.lassosum.pipeline | Source code |
| sumstatsvalidate.lassosum.pipeline | Source code |
| validate | Source code |
| validate.lassosum.pipeline | Source code |
| write.table2 | Source code |
