runTopGO: Return a data frame of gene annotations Takes a dataframe...

Description Usage Arguments Value

View source: R/runTopGO.R

Description

Return a data frame of gene annotations Takes a dataframe having output from limma, cleans up to remove unwanted columns and annotates it

Usage

1
runTopGO(tt, organism, pcutoff = 0.1)

Arguments

organism

: mouse for Mus musculus (mouse) Rat for Rattus norvegicus (Rat) and human for Homo sapiens (humans)

ids

: List of ENSEMBL IDs

Value

Dataframe with limma data and the annotation


Morriseylab/ExpressExtras documentation built on Sept. 1, 2021, 3:50 p.m.