runTopGO: Return a data frame of gene annotations Takes a dataframe...
In Morriseylab/ExpressExtras:
runTopGO R Documentation
Return a data frame of gene annotations
Takes a dataframe having output from limma, cleans up to remove unwanted columns and annotates it
Description
Return a data frame of gene annotations
Takes a dataframe having output from limma, cleans up to remove unwanted columns and annotates it
Usage
runTopGO(tt, organism, pcutoff = 0.1)
Arguments
organism
: mouse for Mus musculus (mouse) Rat for Rattus norvegicus (Rat) and human for Homo sapiens (humans)
ids
: List of ENSEMBL IDs
Value
Dataframe with limma data and the annotation
Morriseylab/ExpressExtras documentation built on April 2, 2022, 9:36 a.m.
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| runTopGO | R Documentation |
Return a data frame of gene annotations Takes a dataframe having output from limma, cleans up to remove unwanted columns and annotates it
Description
Return a data frame of gene annotations Takes a dataframe having output from limma, cleans up to remove unwanted columns and annotates it
Usage
runTopGO(tt, organism, pcutoff = 0.1)
Arguments
organism |
: mouse for Mus musculus (mouse) Rat for Rattus norvegicus (Rat) and human for Homo sapiens (humans) |
ids |
: List of ENSEMBL IDs |
Value
Dataframe with limma data and the annotation
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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