Files in MortenVinther/FishStomachs
Compilation of stomach contents data
.Rbuildignore
.gitignore
DESCRIPTION
FishStomachs.Rproj
Meta/vignette.rds
NAMESPACE
R/ICES_year_of_the_stomach.R
R/STOMdiet.R
R/STOMobs.R
R/add_aphia.R
R/add_nodc.R
R/add_strata.R
R/aggregate_sample_id.R
R/bias_correct_energy_etc.R
R/bias_correct_regurgitated.R
R/bootstrapping.R
R/change_data.R
R/check_unique_sample_id.R
R/combine_years.R
R/detailed_output.R
R/group_preys.R
R/individual_prey_weights_from_pooled_weight.R
R/make_length_classess.R
R/model_output.R
R/pool_sample_id_size.R
R/population_stom.R
R/put_length_classes_on.R
R/read_exchange_data.R
R/redistribution.R
R/stom.control.R
R/stom_attributes.R
R/strata_stom.R
R/sum_stom_functions.R
R/utils-pipe.R
README.Rmd
README.md
_pkgdown.yml
cod_sample.txt
inst/extdata/NODC_latin.csv
inst/extdata/bt5.Rdata
inst/extdata/cod_stom_1991.csv
inst/extdata/combine_year.csv
inst/extdata/consum_nodc.csv
inst/extdata/energy_density_and_armament.csv
inst/extdata/ex01.Rdata
inst/extdata/ex02.Rdata
inst/extdata/ex03d.Rdata
inst/extdata/ex03half.Rdata
inst/extdata/from_to_species.csv
inst/extdata/length_classes.csv
inst/extdata/length_classes_config.csv
inst/extdata/other_food_nodc.csv
inst/extdata/parameters.csv
inst/extdata/species_info.csv
inst/extdata/temperature.csv
inst/extdata/weighting_total.csv
inst/stomach_format.csv
man/STOMcontrol-class.Rd
man/add_Aphia_ID.Rd
man/add_NODC_ID.Rd
man/add_missing_boots.Rd
man/add_strata.Rd
man/aggregate_within_sample.Rd
man/as.data.frame.STOMdiet.Rd
man/as.data.frame.STOMobs.Rd
man/as_STOMdiet.Rd
man/as_STOMobs.Rd
man/bias_correct_energy_etc.Rd
man/bias_correct_regurgitated.Rd
man/bootsMean.Rd
man/bootstrap_addVar.Rd
man/bootstrap_data.Rd
man/bootstrap_show.Rd
man/c.STOMdiet.Rd
man/c.STOMobs.Rd
man/calc_population_stom.Rd
man/change_data.Rd
man/check_before_strata_aggregation.Rd
man/check_unique_diet_id.Rd
man/check_unique_sample_id.Rd
man/cleanup.Rd
man/combine_years.Rd
man/convert_year_of_the_stomach.Rd
man/diet_prey_to_other.Rd
man/diet_relative.Rd
man/diet_sum.Rd
man/do_detailed_output.Rd
man/do_detailed_output_diet.Rd
man/edit_control.Rd
man/from_to_species_diet.Rd
man/get_control.Rd
man/group_prey_species.Rd
man/length.STOMobs.Rd
man/make_criteria_set.Rd
man/make_from_to_species.Rd
man/make_length_classess.Rd
man/make_template_strata_weighting.Rd
man/model_output.Rd
man/pipe.Rd
man/plot.STOMdiet.Rd
man/plotSize.Rd
man/plotboots.Rd
man/plotboots.size.Rd
man/plotdif.Rd
man/pool_data.Rd
man/prey_w_from_pooled_weight.Rd
man/print-STOMcontrol-method.Rd
man/print.STOMdiet.Rd
man/print.STOMobs.Rd
man/put_size_class_on_predator.Rd
man/put_size_class_on_prey.Rd
man/read_exchange_data.Rd
man/redist_unidentified_prey_lengths.Rd
man/redist_unidentified_prey_sp.Rd
man/strata_aggregate.Rd
man/subset.STOMdiet.Rd
man/subset.STOMobs.Rd
man/summary.STOMdiet.Rd
man/summary.STOMobs.Rd
man/table_strata_prey_preyl.Rd
man/update.STOMobs.Rd
man/validSTOMcontrol.Rd
man/write_exchange_data.Rd
source.Rdata
vignettes/.gitignore
vignettes/FishStomachs.Rmd
vignettes/ex01_Read_and_manipulate_data.Rmd
vignettes/ex02_More_data_manipulations.Rmd
vignettes/ex03_Estimate_population_diet.Rmd
vignettes/ex04_Population_diet.Rmd
vignettes/ex05_Create_data_for_model.Rmd
vignettes/ex06_Bootstrapping.Rmd
