Files in MoseleyBioinformaticsLab/visualizationQualityControl
Development of visualization methods for quality control
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/correlations.R
R/data_filtering.R
R/heatmaps.R
R/matching_features.R
R/principal_component_testing.R
R/principal_components.R
R/sd_rsd_summaries.R
R/split_groups.R
R/utils-pipe.R
README.Rmd
README.html
README.md
README_files/figure-markdown_strict/colormapandheatmap-1.png
README_files/figure-markdown_strict/determine_outliers-1.png
README_files/figure-markdown_strict/determine_outliers-2.png
README_files/figure-markdown_strict/do_pca-1.png
README_files/figure-markdown_strict/median_correlations-1.png
README_files/figure-markdown_strict/median_correlations-2.png
README_files/figure-markdown_strict/outlier_fraction-1.png
README_files/figure-markdown_strict/outlier_fraction-2.png
_pkgdown.yml
data/grp_cor.rda
data/grp_cor_data.rda
data/grp_data.rda
data/grp_exp_data.rda
data/grp_info.rda
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docs/articles/pca_testing_files/header-attrs-2.7/header-attrs.js
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man/outlier_fraction.Rd
man/pipe.Rd
man/similarity_reorder.Rd
man/similarity_reorderbyclass.Rd
man/split_groups.Rd
man/summarize_data.Rd
man/visqc_cor_pca_scores.Rd
man/visqc_heatmap.Rd
man/visqc_score_contributions.Rd
man/visqc_test_pca_loadings.Rd
man/visqc_test_pca_scores.Rd
other_tests/all_na_comparisons.R
test_kendalltau.R
test_numpy_kendall.R
tests/testthat.R
tests/testthat/_snaps/median_correlation.md
tests/testthat/_snaps/outlier_fraction.md
tests/testthat/all_cor.rds
tests/testthat/all_cor_names.rds
tests/testthat/data_cor1
tests/testthat/data_cor2
tests/testthat/grp1_grp2_2class.rds
tests/testthat/grp1_grp2_2class2.rds
tests/testthat/grp1_single.rds
tests/testthat/grp1_single_class1.rds
tests/testthat/grp1_single_class2.rds
tests/testthat/in_data_dbl_class.rds
tests/testthat/in_data_single_class.rds
tests/testthat/in_data_switch.rds
tests/testthat/test-classcolors.R
tests/testthat/test-median_correlation.R
tests/testthat/test-outlier-detection.R
tests/testthat/test-outlier_fraction.R
tests/testthat/test-splitting_groups.R
tests/testthat/test_filtering.R
tests/testthat/test_heatmapsorting.R
tests/testthat/zero_1.rds
tests/testthat/zero_2.rds
vignettes/.gitignore
vignettes/pca_testing.Rmd
vignettes/quality_control.Rmd
visualizationQualityControl.Rproj
