Description Usage Arguments Value Examples
This function tests the effects of rarefying your parturition model on model accuracy. You can use this to help determine the fix rate needed for you data/study/species
1 2 3 | Part_fixrate(input = "/home/puma/Desktop/RunningPart/Data/StarkeyElk_ReadyData.RData",
name, saveby = "Study", ncpu = 75, basefolder, sampsize = 80,
prepboots = 75, finboots = 100, max_fix = 12)
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input |
Username for Iridium Account (not stored) as character vector |
name |
Password for Iridium Account (not stored) as character vector |
saveby |
Directory to download the file to |
ncpu |
Type of collar/system (currently only supports 'ATS/IRID' and 'ATS/GSTAR') |
basefolder |
folder to save output to (eg '/home/puma/Desktop/Parts/') |
sampsize |
Percent of animals to use to train model (default percent = 80) |
prepboots |
bootstraps to use when preparing variables/model (~20 is sufficient) |
finboots |
bootstraps to use when creating final model (200-1000) |
max_fix |
max fix rate to test expressed as number (ie 12) |
outputs a new folder for each fix rate, goes from 1 to max_fix
1 | fixrate(input = "/home/puma/Desktop/RunningPart/Data/StarkeyElk_ReadyData.RData", name = 'StarkElk', saveby = 'Study', ncpu = 75, basefolder = '/home/puma/Desktop/RunningPart/NewRarefy/', sampsize = 80, prepboots = 75, finboots = 100, max_fix = 12)
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