Crosstable: Crosstable plot

In Mthrun/DataVisualizations: Visualizations of High-Dimensional Data

Crosstable plot

Description

Presents a heatmap with values and a cross table of given Data matrix of two features and a bin width or percentualized values. In this approach the bin width is fixes. A more general way to approach this is the kernel density estimation plot of PDEscatter.

Usage

Crosstable(Data, xbins = seq(0, 100, 5), ybins = xbins, 

NormalizationFactor = 1, PlotIt = TRUE, main='Cross Table',

PlotText=TRUE,TextDigits=0,TextProbs=c(0.05,0.95))

Arguments

Data	[1:n,1:2] matrix of two features from which the cross table should be generated from
xbins	[1:k] start of k bins as a vector generated with seq of the first feature of data. Default setting assumes percentiled values between zero and 100.
ybins	[1:k] start of k bins as a vector generated with seq of the second feature of data. Normally the same for both features, other settings are only possible if the length k is equal.
NormalizationFactor	Optional, Data feautures can be seen as regular time series, e.g. 1 measurement for a minute, in this case it is useful to normalize the output, e.g. to hours, then NormalizationFactor=60
PlotIt	Optional, Plots the heatmap if TRUE. The first feature is on the x-axis (left to right) and the second on y-axis (bottom to top).
main	In case of for PlotIt=TRUE: title of plot, see title
PlotText	In case of for PlotIt=TRUE: Default TRUE: plots text in heatmap with the values of the crosstable
TextDigits	In case of for TextDigits=TRUE: integer indicating the number of decimal places to use in round.
TextProbs	In case of for TextDigits=TRUE: [1:2] numeric vector of two probabilities defining the thresholds for white text to grey text and grey text to black text, e.g. below the first threshold (Default 0.05) all values (5% of values) will be printed in white because the lowest values of the heatmap are blue. The second value of 0.95 works well if cross table has many zeros; uses quantile internally.

Details

The interval in each bin is closed to the left and opened to the right. The cross table can be seen as a two-dimensional histogram. The idea to add histograms to the table is taken from [Charpentier. 2014].

Value

The cross table in invisible mode which depicts the number of values (frequency) in an specific range with regard to two features.

The first feature is on the x-axis (left to right), and the second on y-axis (top to bottom) contrary to the plot where it is bottom to top.

Note

For non percentiled values the PlotText part does not seem always to work, but I currently dont know why the text does not always overlap with the heatmap.

Author(s)

Michael Thrun

References

[Charpentier. 2014] Charpentier, Arthur, ed. Computational actuarial science with R. CRC Press, 2014.

See Also

table, image, PDEscatter

Examples

data(ITS)
data(MTY)
#simple but not a good transformation
Data=(cbind(ITS/max(ITS),MTY/max(MTY)))*100
#choice for bins could be better
Crosstable(Data)

Mthrun/DataVisualizations documentation built on Jan. 16, 2024, 1:01 a.m.