smr_wrangling: Initial Wrangling for HSMR data

In NHS-NSS-transforming-publications/hsmr: Reproducible Analytical Pipeline of Hospital Standardised Mortality Ratios Quarterly Publication

Initial Wrangling for HSMR data

Description

Creates the majority of necessary variables to be used in the HSMR model.

Usage

smr_wrangling(smr01, gro, pdiags, postcode, morbs, spec)

Arguments

smr01	Input tibble for admissions, see details.
gro	Input tibble for deaths, see details.
pdiags	Input tibble for primary diagnosis groupings lookup.
postcode	Input tibble for deprivation lookup.
morbs	Input tibble for the charlson index for comorbidities lookup.
spec	Input tibble for for specialty groupings lookup.

Details

smr_wrangling expects a tibble of data extracted from SMR01. It also expects tibbles of data extracted from the GRO deaths database and lookups for primary diagnosis, postcode (for deprivation) and morbidities (comorbs_sum). This is the first step in a four-step process. The next steps are smr_pmorbs, then smr_model and finally smr_data.

NHS-NSS-transforming-publications/hsmr documentation built on June 30, 2024, 11:48 a.m.