predict.tandem: Creates a prediction using a tandem-object

In NKI-CCB/TANDEM: A Two-Stage Approach to Maximize Interpretability of Drug Response Models Based on Multiple Molecular Data Types

Description

Creates a prediction using a tandem-object.

Usage

## S3 method for class 'tandem'
predict(object, newx, ...)

Arguments

object	A tandem-object, as returned by tandem()
newx	A feature matrix, where the rows correspond to samples and the columns to features.
...	Not used. Other arguments for predict().

Value

The predicted response vector.

Examples

# unpack example data
x = example_data$x
y = example_data$y
upstream = example_data$upstream

# fit a tandem model, determine the coefficients and create a prediction
fit = tandem(x, y, upstream, alpha=0.5)
beta = coef(fit)
y_hat = predict(fit, newx=x)

NKI-CCB/TANDEM documentation built on Nov. 25, 2019, 11:18 p.m.