tests/testthat/test-constants.R

In NOAA-EDAB/Rpath: R implementation of Ecopath with Ecosim

# ---- Modify this toggle to TRUE to generate the baseline files. ----
# ---- Reset it back to FALSE to run the tests. ----------------------
# CREATE_BASELINE_FILES <- TRUE
CREATE_BASELINE_FILES <- FALSE

NUMBER_OF_STEPS <- 5 # should be an odd multiple of nrows=600 (i.e., 5,15,30)
FACTOR_VALUE <- 5
SEED_VALUE   <- 1 
SEED_OFFSET <- 2000
TOLERANCE_VALUE <- 1e-5
RUN_QUIET <- TRUE
YLIMIT_DIFFERENCE_PLOTS <- 0.05
FORCED_MIGRATION_SCALE_FACTOR_JITTER <- 1000
FORCED_MIGRATION_SCALE_FACTOR_STEPIFY <- 100
PLOT_TYPE <- 1 # 1 = Baseline and Current superimposed, 2 = difference of (Current-Baseline)
PLOT_SHOW <- 1 # 1 - All Plots, 2 = Only plots reflecting test errors # Not sure if can be implemented
# INPUT_DATA_DIR_BASELINE  <- 'data/input/baseline'
INPUT_DATA_DIR_CURRENT   <- here::here('tests/testthat/data/input')
INPUT_DATA_DIR_BASELINE  <- INPUT_DATA_DIR_CURRENT
OUTPUT_DATA_DIR          <- here::here('tests/testthat/data/output')
FORCED_BIOMASS   <- "Forced Bio"
FORCED_MIGRATION <- "Forced Migrate"
FORCED_EFFORT    <- "Forced Effort"
FORCED_FRATE     <- 'Forced FRate'
FORCED_CATCH     <- 'Forced Catch'
JITTERED <- "Jittered"
STEPPED  <- "Stepped"
JITTER_AMOUNT_PCT <- 0.01 # This is 1% jitter
FORCED_MIGRATION_BIOMASS_PCT <- 0.1 # This is a 10% jitter for the initial value
POSITIVE_ONLY <- TRUE
POSITIVE_AND_NEGATIVE <- FALSE