plot_ts: Plot time series data for a particular species

In NOAA-EDAB/assessmentdata: Provides access to NOAAs stock SMART data

Plot time series data for a particular species

Description

Exploratory plots of Catch, Abundance, F, Recruitment for all assessments for a particular species

Usage

plot_ts(
  itis = NULL,
  stock = NULL,
  metric = "Catch",
  facetplot = F,
  printfig = T
)

Arguments

itis	Numeric. Species ITIS code
stock	Character. Full name of stock (only required if more than one stock exists for ITIS code)
metric	Character vector. Specifying which metric to plot (Catch, Abundance, Fmort, Recruitment)
facetplot	Boolean. How to plot results. Plot each assessment in its own facet (T) or pplot all assessments on a single plot (default = F)
printfig	Boolean. Print figure to figure window (Default = T)

Value

A list of two items is returned

plot	ggplot object
data	dataframe used in the plotting

Units

The units of some of the metrics change over time. For example, catch for one assessment may be presented in metric tons whereas other assessments may be in thousand metric tons. This is not resolved in the plotting. When this arises it is best to use facet = T since each facet uses its own yaxis scale

NOAA-EDAB/assessmentdata documentation built on Nov. 30, 2024, 8:48 p.m.