comp_names: Compare scientific names against NaTron

In NTNU-VM/natronbatchupload: a package to facilitate the uploading of datasets to NaTron

Description

This functions checks the scientificNames column in your dataset against the Taxa register in NaTron and return a warning when there are species not in the register (either due to misspelling, synonyms, etc.)

Usage

comp_names(names, conn)

Arguments

names	A vector of scientific species names.
conn	DB connection with access permission (see natron_connect()).

Value

Returns a dataframe with your species list alongside the three best gueses for taxon in NaTron

Examples

## Not run: 
data("setesdal")
myConnection <- natron_connect("YOUR-USERNAME-HERE")

myNames <- comp_names(
    names = setesdal$scientificName,
    conn = myConnection)

View(myNames)

## End(Not run)

NTNU-VM/natronbatchupload documentation built on Oct. 12, 2019, 5:49 a.m.