| candidate_methylated_genes | Select candidate methylation genes |
| dist_stopcodon | Distance to stop codon |
| findpeakcenter | Obtain peak center |
| gene_methy_level_distdecay | Obtain gene's methylation level |
| map_peak_longTX | Map peak sites to the longest transcript |
| match_expr_methy | Match expression and methylation |
| obtain_gene_expression | Obtain gene expression |
| obtain_initial_parameters | Obtain initial parameters |
| obtain_peakinfor | Obtain peak sites information. |
| peak_calling | Peak calling based on 'exomePeak2' for MeRIP-seq dataset |
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